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Open Targets Genetics is no longer maintained and will soon be deprecated. See here for more info.
Variant summary
Location
Neighbourhood
Nearest gene: N/A
Nearest coding gene: N/A
Variant Effect Predictor (VEP)
Combined Annotation Dependent Depletion (CADD)
raw: N/Ascaled: N/A
Population allele frequencies
Assigned genes
Which genes are functionally implicated by this variant?
...
PheWAS
Which traits are associated with this variant in the UK Biobank, FinnGen, and/or GWAS Catalog summary statistics repository? Only traits with P-value < 0.005 are returned
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| Study ID | Trait | Trait Category | P-value | Beta | Odds Ratio | PMID | Author (Year) | N Cases | N Overall | Has sumstats |
|---|---|---|---|---|---|---|---|---|---|---|
None | None |
GWAS lead variants
Which GWAS lead variants are linked with this variant?
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| Lead Variant | Lead Variant rsID | Tag Variant | Study ID | Trait | Lead Variant P-value | Beta | Odds Ratio | 95% Confidence Interval | PMID | Author (Year) | Study N | LD (r²) | Is in 95% Credible Set | Has sumstats | View |
|---|
Tag variants
Which variants tag (through LD or fine-mapping) this lead variant?
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| Lead Variant | Tag Variant | Tag Variant rsID | Study ID | Trait | Lead Variant P-value | PMID | Author (Year) | Study N | LD (r²) | Posterior Probability | Has sumstats |
|---|
